Having an issue processing my first flight with my Mavic 3M.
Receiving the error after most of the processing:
“[ERROR] Uh oh! Processing stopped because of strange values in the reconstruction. This is often a sign that the input data has some issues or the software cannot deal with it. Have you followed best practices for data acquisition? See Flying Tips — OpenDroneMap 3.1.7 documentation
100 - done.”
Server Ubuntu latest version and latest build of webodm.
4 Cores
16 G Ram
100G Disk
375 Images in project ( 75 Images of Multispectral x 5 bands )
Here is the part of the task output:
… output truncated at 500 lines …
Generating texture patches:
Running… done. (Took 2.992s)
2389 texture patches.
Running global seam leveling:
Create matrices for optimization… done.
Lhs dimensionality: 183245 x 183245
Calculating adjustments:
Color channel 0: CG took 101 iterations. Residual is 9.26459e-05
Color channel 2: CG took 101 iterations. Residual is 9.26459e-05
Color channel 1: CG took 101 iterations. Residual is 9.26459e-05
Took 0.476 seconds
Adjusting texture patches 100%… done. (Took 1.243s)
Running local seam leveling:
Blending texture patches 100%… done. (Took 22.047s)
Generating texture atlases:
Sorting texture patches… done.
Working on atlas 14 100%… done.
Finalizing texture atlases… done. (Took: 0s)
Building objmodel:
Saving model… done.
Whole texturing procedure took: 74.147s
[INFO] Generating glTF Binary
[INFO] Converting /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_texturing/odm_textured_model_geo.obj → /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_texturing/odm_textured_model_geo.glb
[INFO] Loading /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_texturing/odm_textured_model_geo.obj
[INFO] Loading odm_textured_model_geo_material0000_map_Kd.tif
2023-05-04 18:17:08,365 WARNING: CPLE_AppDefined in /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_texturing/odm_textured_model_geo_material0000_map_Kd.tif: RowsPerStrip not defined … assuming all one strip.
[INFO] Loading odm_textured_model_geo_material0001_map_Kd.tif
2023-05-04 18:17:08,554 WARNING: CPLE_AppDefined in /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_texturing/odm_textured_model_geo_material0001_map_Kd.tif: RowsPerStrip not defined … assuming all one strip.
[INFO] Loading odm_textured_model_geo_material0002_map_Kd.tif
2023-05-04 18:17:08,734 WARNING: CPLE_AppDefined in /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_texturing/odm_textured_model_geo_material0002_map_Kd.tif: RowsPerStrip not defined … assuming all one strip.
[INFO] Loading odm_textured_model_geo_material0003_map_Kd.tif
2023-05-04 18:17:08,903 WARNING: CPLE_AppDefined in /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_texturing/odm_textured_model_geo_material0003_map_Kd.tif: RowsPerStrip not defined … assuming all one strip.
[INFO] Loading odm_textured_model_geo_material0004_map_Kd.tif
2023-05-04 18:17:09,071 WARNING: CPLE_AppDefined in /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_texturing/odm_textured_model_geo_material0004_map_Kd.tif: RowsPerStrip not defined … assuming all one strip.
[INFO] Loading odm_textured_model_geo_material0005_map_Kd.tif
2023-05-04 18:17:09,244 WARNING: CPLE_AppDefined in /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_texturing/odm_textured_model_geo_material0005_map_Kd.tif: RowsPerStrip not defined … assuming all one strip.
[INFO] Loading odm_textured_model_geo_material0006_map_Kd.tif
2023-05-04 18:17:09,291 WARNING: CPLE_AppDefined in /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_texturing/odm_textured_model_geo_material0006_map_Kd.tif: RowsPerStrip not defined … assuming all one strip.
[INFO] Loading odm_textured_model_geo_material0007_map_Kd.tif
2023-05-04 18:17:09,309 WARNING: CPLE_AppDefined in /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_texturing/odm_textured_model_geo_material0007_map_Kd.tif: RowsPerStrip not defined … assuming all one strip.
[INFO] Loading odm_textured_model_geo_material0008_map_Kd.tif
2023-05-04 18:17:09,325 WARNING: CPLE_AppDefined in /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_texturing/odm_textured_model_geo_material0008_map_Kd.tif: RowsPerStrip not defined … assuming all one strip.
[INFO] Loading odm_textured_model_geo_material0009_map_Kd.tif
2023-05-04 18:17:09,330 WARNING: CPLE_AppDefined in /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_texturing/odm_textured_model_geo_material0009_map_Kd.tif: RowsPerStrip not defined … assuming all one strip.
[INFO] Loading odm_textured_model_geo_material0010_map_Kd.tif
2023-05-04 18:17:09,335 WARNING: CPLE_AppDefined in /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_texturing/odm_textured_model_geo_material0010_map_Kd.tif: RowsPerStrip not defined … assuming all one strip.
[INFO] Loading odm_textured_model_geo_material0011_map_Kd.tif
2023-05-04 18:17:09,337 WARNING: CPLE_AppDefined in /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_texturing/odm_textured_model_geo_material0011_map_Kd.tif: RowsPerStrip not defined … assuming all one strip.
[INFO] Loading odm_textured_model_geo_material0012_map_Kd.tif
2023-05-04 18:17:09,340 WARNING: CPLE_AppDefined in /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_texturing/odm_textured_model_geo_material0012_map_Kd.tif: RowsPerStrip not defined … assuming all one strip.
[INFO] Loading odm_textured_model_geo_material0013_map_Kd.tif
2023-05-04 18:17:09,342 WARNING: CPLE_AppDefined in /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_texturing/odm_textured_model_geo_material0013_map_Kd.tif: RowsPerStrip not defined … assuming all one strip.
2023-05-04 18:17:12,659 WARNING: CPLE_NotSupported in driver JPEG does not support creation option JPEG_QUALITY
2023-05-04 18:17:13,234 WARNING: CPLE_NotSupported in driver JPEG does not support creation option JPEG_QUALITY
2023-05-04 18:17:13,835 WARNING: CPLE_NotSupported in driver JPEG does not support creation option JPEG_QUALITY
2023-05-04 18:17:14,418 WARNING: CPLE_NotSupported in driver JPEG does not support creation option JPEG_QUALITY
2023-05-04 18:17:15,044 WARNING: CPLE_NotSupported in driver JPEG does not support creation option JPEG_QUALITY
2023-05-04 18:17:15,599 WARNING: CPLE_NotSupported in driver JPEG does not support creation option JPEG_QUALITY
2023-05-04 18:17:15,732 WARNING: CPLE_NotSupported in driver JPEG does not support creation option JPEG_QUALITY
2023-05-04 18:17:15,773 WARNING: CPLE_NotSupported in driver JPEG does not support creation option JPEG_QUALITY
2023-05-04 18:17:15,814 WARNING: CPLE_NotSupported in driver JPEG does not support creation option JPEG_QUALITY
2023-05-04 18:17:15,828 WARNING: CPLE_NotSupported in driver JPEG does not support creation option JPEG_QUALITY
2023-05-04 18:17:15,841 WARNING: CPLE_NotSupported in driver JPEG does not support creation option JPEG_QUALITY
2023-05-04 18:17:15,846 WARNING: CPLE_NotSupported in driver JPEG does not support creation option JPEG_QUALITY
2023-05-04 18:17:15,851 WARNING: CPLE_NotSupported in driver JPEG does not support creation option JPEG_QUALITY
2023-05-04 18:17:15,856 WARNING: CPLE_NotSupported in driver JPEG does not support creation option JPEG_QUALITY
[INFO] Writing…
[INFO] Wrote /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_texturing/odm_textured_model_geo.glb
[INFO] Compressing with draco
[INFO] running draco_transcoder -i “/var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_texturing/odm_textured_model_geo.glb” -o “/var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_texturing/odm_textured_model_geo_compressed.glb” -qt 16 -qp 16
Transcode /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_texturing/odm_textured_model_geo.glb 1796
[INFO] Writing MVS Textured file in: /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_texturing_25d/odm_textured_model_geo.obj
[INFO] running “/code/SuperBuild/install/bin/texrecon” “/var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/opensfm/undistorted/reconstruction_rededge.nvm” “/var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_meshing/odm_25dmesh.ply” “/var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_texturing_25d/odm_textured_model_geo” -d gmi -o gauss_clamping -t none --nadir_mode --max_texture_size=8192
/code/SuperBuild/install/bin/texrecon (built on May 3 2023, 07:53:06)
Load and prepare mesh:
Reading PLY: 198942 verts… 396625 faces… done.
Generating texture views:
NVM: Loading file…
NVM: Number of views: 77
NVM: Number of features: 0
Loading 100%… done. (Took 2.551s)
Building adjacency graph:
Adding edges 100%… done. (Took 0.728s)
594313 total edges.
View selection:
Building BVH from 396625 faces… done. (Took: 419 ms)
Calculating face qualities 100%… done. (Took 6.401s)
Postprocessing face infos 100%… done. (Took 0.504s)
Maximum quality of a face within an image: 9999.45
Clamping qualities to 9950.45 within normalization.
Writing data cost file… done.
Optimizing:
Time[s] Energy
0 108192
1 107425
2 103725
2 101845
3 101044
3 100610
4 100356
5 100297
5 100127
6 100015
6 99934
7 99891
7 99855
8 99814
8 99783
9 99759
32974 faces have not been seen
Took: 17.578s
Generating texture patches:
Running… done. (Took 2.875s)
514 texture patches.
Running global seam leveling:
Create matrices for optimization… done.
Lhs dimensionality: 191290 x 191290
Calculating adjustments:
Color channel 2: CG took 77 iterations. Residual is 9.06586e-05
Color channel 1: CG took 77 iterations. Residual is 9.06586e-05
Color channel 0: CG took 77 iterations. Residual is 9.06586e-05
Took 0.383 seconds
Adjusting texture patches 100%… done. (Took 1.388s)
Running local seam leveling:
Blending texture patches 100%… done. (Took 13.086s)
Generating texture atlases:
Sorting texture patches… done.
Working on atlas 6 100%… done.
Finalizing texture atlases… done. (Took: 0s)
Building objmodel:
Saving model… done.
Whole texturing procedure took: 60.294s
[INFO] Writing MVS Textured file in: /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_texturing_25d/nir/odm_textured_model_geo.obj
[INFO] running “/code/SuperBuild/install/bin/texrecon” “/var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/opensfm/undistorted/reconstruction_nir.nvm” “/var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_meshing/odm_25dmesh.ply” “/var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_texturing_25d/nir/odm_textured_model_geo” -d gmi -o gauss_clamping -t none --no_intermediate_results --nadir_mode -L “/var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_texturing_25d/odm_textured_model_geo_labeling.vec” --max_texture_size=8192
/code/SuperBuild/install/bin/texrecon (built on May 3 2023, 07:53:06)
Load and prepare mesh:
Reading PLY: 198942 verts… 396625 faces… done.
Generating texture views:
NVM: Loading file…
NVM: Number of views: 77
NVM: Number of features: 0
Loading 100%… done. (Took 2.346s)
Building adjacency graph:
Adding edges 100%… done. (Took 0.729s)
594313 total edges.
Loading labeling from file… done.
Generating texture patches:
Running… done. (Took 2.998s)
514 texture patches.
Running global seam leveling:
Create matrices for optimization… done.
Lhs dimensionality: 191290 x 191290
Calculating adjustments:
Color channel 0: CG took 77 iterations. Residual is 8.96815e-05
Color channel 2: CG took 77 iterations. Residual is 8.96815e-05
Color channel 1: CG took 77 iterations. Residual is 8.96815e-05
Took 0.403 seconds
Adjusting texture patches 100%… done. (Took 1.361s)
Running local seam leveling:
Blending texture patches 100%… done. (Took 13.945s)
Generating texture atlases:
Sorting texture patches… done.
Working on atlas 6 100%… done.
Finalizing texture atlases… done. (Took: 0s)
Building objmodel:
Saving model… done.
Whole texturing procedure took: 45.329s
[INFO] Writing MVS Textured file in: /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_texturing_25d/rgb/odm_textured_model_geo.obj
[INFO] running “/code/SuperBuild/install/bin/texrecon” “/var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/opensfm/undistorted/reconstruction_rgb.nvm” “/var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_meshing/odm_25dmesh.ply” “/var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_texturing_25d/rgb/odm_textured_model_geo” -d gmi -o gauss_clamping -t none --no_intermediate_results --nadir_mode -L “/var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_texturing_25d/odm_textured_model_geo_labeling.vec” --max_texture_size=8192
/code/SuperBuild/install/bin/texrecon (built on May 3 2023, 07:53:06)
Load and prepare mesh:
Reading PLY: 198942 verts… 396625 faces… done.
Generating texture views:
NVM: Loading file…
NVM: Number of views: 77
NVM: Number of features: 0
Loading 100%… done. (Took 3.183s)
Building adjacency graph:
Adding edges 100%… done. (Took 0.74s)
594313 total edges.
Loading labeling from file… done.
Generating texture patches:
Running… done. (Took 3.099s)
514 texture patches.
Running global seam leveling:
Create matrices for optimization… done.
Lhs dimensionality: 191290 x 191290
Calculating adjustments:
Color channel 1: CG took 72 iterations. Residual is 9.92245e-05
Color channel 0: CG took 77 iterations. Residual is 8.91944e-05
Color channel 2: CG took 77 iterations. Residual is 9.99424e-05
Took 0.387 seconds
Adjusting texture patches 100%… done. (Took 1.489s)
Running local seam leveling:
Blending texture patches 100%… done. (Took 13.275s)
Generating texture atlases:
Sorting texture patches… done.
Working on atlas 6 100%… done.
Finalizing texture atlases… done. (Took: 0s)
Building objmodel:
Saving model… done.
Whole texturing procedure took: 49.277s
[INFO] Finished mvs_texturing stage
[INFO] Running odm_georeferencing stage
[INFO] Georeferencing point cloud
[INFO] running pdal translate -i “/var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_filterpoints/point_cloud.ply” -o “/var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_georeferencing/odm_georeferenced_model.laz” ferry transformation --filters.ferry.dimensions=“views => UserData” --writers.las.compression=“lazip” --filters.transformation.matrix=“1 0 0 613190.0 0 1 0 4510867.0 0 0 1 0 0 0 0 1” --writers.las.offset_x=613190.0 --writers.las.offset_y=4510867.0 --writers.las.scale_x=0.001 --writers.las.scale_y=0.001 --writers.las.scale_z=0.001 --writers.las.offset_z=0 --writers.las.a_srs=“+proj=utm +zone=18 +datum=WGS84 +units=m +no_defs +type=crs”
[INFO] Calculating cropping area and generating bounds shapefile from point cloud
[INFO] running pdal translate -i “/var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_georeferencing/odm_georeferenced_model.laz” -o “/var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_georeferencing/odm_georeferenced_model.decimated.las” decimation --filters.decimation.step=40
[INFO] running pdal info --boundary --filters.hexbin.edge_size=1 --filters.hexbin.threshold=0 “/var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_georeferencing/odm_georeferenced_model.decimated.las” > “/var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_georeferencing/odm_georeferenced_model.boundary.json”
[INFO] running pdal info --summary “/var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_georeferencing/odm_georeferenced_model.laz” > “/var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_georeferencing/odm_georeferenced_model.summary.json”
[INFO] running ogr2ogr -overwrite -f GPKG -a_srs “+proj=utm +zone=18 +datum=WGS84 +units=m +no_defs” /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_georeferencing/odm_georeferenced_model.bounds.gpkg /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_georeferencing/odm_georeferenced_model.bounds.geojson
[INFO] Creating Entwine Point Tile output
[INFO] running entwine build --threads 4 --tmp “/var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/entwine_pointcloud-tmp” -i /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_georeferencing/odm_georeferenced_model.laz -o “/var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/entwine_pointcloud”
1/1: /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_georeferencing/odm_georeferenced_model.laz
Dimensions: [
X:int32, Y:int32, Z:int32, Intensity:uint16, ReturnNumber:uint8,
NumberOfReturns:uint8, ScanDirectionFlag:uint8, EdgeOfFlightLine:uint8,
Classification:uint8, ScanAngleRank:float32, UserData:uint8,
PointSourceId:uint16, GpsTime:float64, Red:uint16, Green:uint16, Blue:uint16
]
Points: 4,413,528
Bounds: [(613110, 4510796, -1), (613272, 4510946, 17)]
Scale: 0.001
SRS: EPSG:32618
Adding 0 - /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_georeferencing/odm_georeferenced_model.laz
Joining
Done 0
Saving
00:10 - 100% - 4,413,528 - 1,588 (1,588) M/h - 119W - 0R - 0A
Wrote 4,413,528 points.
[INFO] Finished odm_georeferencing stage
[INFO] Running odm_dem stage
[INFO] Classify: False
[INFO] Create DSM: True
[INFO] Create DTM: False
[INFO] DEM input file /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_georeferencing/odm_georeferenced_model.laz found: True
[INFO] running pdal info --summary “/var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_georeferencing/odm_georeferenced_model.laz” > “/tmp/tmpio5djoi3.json”
[INFO] Point cloud bounds are [minx: 613110.125, maxx: 613271.0562] [miny: 4510796.144, maxy: 4510945.888]
[INFO] DEM resolution is (2995, 3219), max tile size is 4096, will split DEM generation into 1 tiles
[INFO] Generating /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_dem/dsm_r0.08000000000000002_x0_y0.tif (max, radius: 0.08000000000000002, resolution: 0.05)
[INFO] Generating /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_dem/dsm_r0.05656854249492381_x0_y0.tif (max, radius: 0.05656854249492381, resolution: 0.05)
[INFO] Generating /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_dem/dsm_r0.04_x0_y0.tif (max, radius: 0.04, resolution: 0.05)
[INFO] running pdal pipeline -i /tmp/tmpsu2iwr5c.json
[INFO] running pdal pipeline -i /tmp/tmpuznz7_lj.json
[INFO] running pdal pipeline -i /tmp/tmp_ij12jab.json
[INFO] running gdalbuildvrt -input_file_list “/var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_dem/tiles_list.txt” “/var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_dem/tiles.vrt”
0…10…20…30…40…50…60…70…80…90…100 - done.
[INFO] running gdal_translate -co NUM_THREADS=4 -co BIGTIFF=IF_SAFER --config GDAL_CACHEMAX 40.05% “/var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_dem/tiles.vrt” “/var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_dem/tiles.tmp.tif”
Input file size is 3219, 2995
0…10…20…30…40…50…60…70…80…90…100 - done.
[INFO] running gdal_translate -co NUM_THREADS=4 -co BIGTIFF=IF_SAFER --config GDAL_CACHEMAX 40.05% -outsize 10% 0 “/var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_dem/tiles.tmp.tif” “/var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_dem/tiles.small.tif”
100 - done.
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Input file size is 3219, 2995
0…10…20…30…40…50…60…70…80…90…100 - done.
[INFO] running gdalbuildvrt -resolution highest -r bilinear “/var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_dem/merged.vrt” “/var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_dem/tiles.small_filled.tif” “/var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_dem/tiles.tmp.tif”
0…10…20…30…40…50…60…70…80…90…100 - done.
[INFO] running gdal_translate -co NUM_THREADS=4 -co TILED=YES -co BIGTIFF=IF_SAFER -co COMPRESS=DEFLATE --config GDAL_CACHEMAX 40.05% “/var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_dem/merged.vrt” “/var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_dem/tiles.tif”
Input file size is 3219, 2995
0…10…20…30…40…50…60…70…80…90…100 - done.
[INFO] Starting smoothing…
[INFO] Smoothing iteration 1
[INFO] Smoothing completed in 0:00:03.473337
[INFO] Completed smoothing to create /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_dem/dsm.tif in 0:00:05.320683
[INFO] Completed dsm.tif in 0:00:12.987925
[INFO] Cropping /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_dem/dsm.tif
[INFO] running gdalwarp -cutline /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_georeferencing/odm_georeferenced_model.bounds.gpkg -crop_to_cutline -co TILED=YES -co COMPRESS=DEFLATE -co BLOCKXSIZE=512 -co BLOCKYSIZE=512 -co BIGTIFF=IF_SAFER -co NUM_THREADS=4 /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_dem/dsm.original.tif /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_dem/dsm.tif --config GDAL_CACHEMAX 40.05%
Creating output file that is 3097P x 2906L.
Processing /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_dem/dsm.original.tif [1/1] : 0Using internal nodata values (e.g. -9999) for image /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_dem/dsm.original.tif.
Copying nodata values from source /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_dem/dsm.original.tif to destination /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_dem/dsm.tif.
…10…20…30…40…50…60…70…80…90…100 - done.
[INFO] Optimizing /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_dem/dsm.tif as Cloud Optimized GeoTIFF
[INFO] running gdal_translate -of COG -co NUM_THREADS=4 -co BLOCKSIZE=256 -co COMPRESS=DEFLATE -co PREDICTOR=2 -co BIGTIFF=IF_SAFER -co RESAMPLING=NEAREST --config GDAL_CACHEMAX 40.05% --config GDAL_NUM_THREADS 4 “/var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_dem/dsm.tif” “/var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_dem/dsm_cogeo.tif”
Input file size is 3097, 2906
0…10…20…30…40…50…60…70…80…90…100 - done.
[INFO] Finished odm_dem stage
[INFO] Running odm_orthophoto stage
[INFO] running “/code/SuperBuild/install/bin/odm_orthophoto” -inputFiles /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_texturing_25d/odm_textured_model_geo.obj,/var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_texturing_25d/nir/odm_textured_model_geo.obj,/var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_texturing_25d/rgb/odm_textured_model_geo.obj -logFile “/var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_orthophoto/odm_orthophoto_log.txt” -outputFile “/var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_orthophoto/odm_orthophoto_render.tif” -resolution 20.0 -verbose -outputCornerFile “/var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_orthophoto/odm_orthophoto_corners.txt” -bands RedEdge,NIR,RGB -outputDepthIdx 0
Setting bit depth from input model /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_texturing_25d/odm_textured_model_geo.obj
Reading mesh file… /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_texturing_25d/odm_textured_model_geo.obj
Found material0000
Loading odm_textured_model_geo_material0000_map_Kd.tif
Found material0001
Loading odm_textured_model_geo_material0001_map_Kd.tif
Found material0002
Loading odm_textured_model_geo_material0002_map_Kd.tif
Found material0003
Loading odm_textured_model_geo_material0003_map_Kd.tif
Found material0004
Loading odm_textured_model_geo_material0004_map_Kd.tif
Found material0005
Loading odm_textured_model_geo_material0005_map_Kd.tif
Mesh file read.
Texture depth set to 2
Reading mesh file… /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_texturing_25d/odm_textured_model_geo.obj
Found material0000
Loading odm_textured_model_geo_material0000_map_Kd.tif
Found material0001
Loading odm_textured_model_geo_material0001_map_Kd.tif
Found material0002
Loading odm_textured_model_geo_material0002_map_Kd.tif
Found material0003
Loading odm_textured_model_geo_material0003_map_Kd.tif
Found material0004
Loading odm_textured_model_geo_material0004_map_Kd.tif
Found material0005
Loading odm_textured_model_geo_material0005_map_Kd.tif
Mesh file read.
Boundary points:
Point 1: -79.875 -70.8164
Point 2: -79.875 78.9036
Point 3: 81.045 78.9036
Point 4: 81.045 -70.8164
Model bounds x : -79.875 → 81.045
Model bounds y : -70.8164 → 78.9036
Model area : 24092.9m2
Model resolution, width x height : 3219x2995
Translating and scaling mesh…
Rendering the ortho photo…
Texture channels: 1
Texture depth: 16bit
Rendering material0000 … done
Rendering material0001 … done
Rendering material0002 … done
Rendering material0003 … done
Rendering material0004 … done
Rendering material0005 … done
… model rendered
Reading mesh file… /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_texturing_25d/nir/odm_textured_model_geo.obj
Found material0000
Loading odm_textured_model_geo_material0000_map_Kd.tif
Found material0001
Loading odm_textured_model_geo_material0001_map_Kd.tif
Found material0002
Loading odm_textured_model_geo_material0002_map_Kd.tif
Found material0003
Loading odm_textured_model_geo_material0003_map_Kd.tif
Found material0004
Loading odm_textured_model_geo_material0004_map_Kd.tif
Found material0005
Loading odm_textured_model_geo_material0005_map_Kd.tif
Mesh file read.
Boundary points:
Point 1: -79.875 -70.8164
Point 2: -79.875 78.9036
Point 3: 81.045 78.9036
Point 4: 81.045 -70.8164
Model bounds x : -79.875 → 81.045
Model bounds y : -70.8164 → 78.9036
Model area : 24092.9m2
Model resolution, width x height : 3219x2995
Translating and scaling mesh…
Rendering the ortho photo…
Texture channels: 1
Texture depth: 16bit
Rendering material0000 … done
Rendering material0001 … done
Rendering material0002 … done
Rendering material0003 … done
Rendering material0004 … done
Rendering material0005 … done
… model rendered
Reading mesh file… /var/www/data/a57926ee-2c27-4d59-bfd7-ba31558fbb2d/odm_texturing_25d/rgb/odm_textured_model_geo.obj
Found material0000
Loading odm_textured_model_geo_material0000_map_Kd.png
Found material0001
Loading odm_textured_model_geo_material0001_map_Kd.png
Found material0002
Loading odm_textured_model_geo_material0002_map_Kd.png
Found material0003
Loading odm_textured_model_geo_material0003_map_Kd.png
Found material0004
Loading odm_textured_model_geo_material0004_map_Kd.png
Found material0005
Loading odm_textured_model_geo_material0005_map_Kd.png
Mesh file read.
Boundary points:
Point 1: -79.875 -70.8164
Point 2: -79.875 78.9036
Point 3: 81.045 78.9036
Point 4: 81.045 -70.8164
Model bounds x : -79.875 → 81.045
Model bounds y : -70.8164 → 78.9036
Model area : 24092.9m2
Model resolution, width x height : 3219x2995
Translating and scaling mesh…
Rendering the ortho photo…
Texture channels: 3
Texture depth: 16bit
Rendering material0000 … done
Rendering material0001 … done
Rendering material0002 … Segmentation fault (core dumped)
===== Dumping Info for Geeks (developers need this to fix bugs) =====
Child returned 139
Traceback (most recent call last):
File “/code/stages/odm_app.py”, line 81, in execute
self.first_stage.run()
File “/code/opendm/types.py”, line 398, in run
self.next_stage.run(outputs)
File “/code/opendm/types.py”, line 398, in run
self.next_stage.run(outputs)
File “/code/opendm/types.py”, line 398, in run
self.next_stage.run(outputs)
[Previous line repeated 7 more times]
File “/code/opendm/types.py”, line 377, in run
self.process(self.args, outputs)
File “/code/stages/odm_orthophoto.py”, line 90, in process
system.run('“{odm_ortho_bin}” -inputFiles {models} ’
File “/code/opendm/system.py”, line 110, in run
raise SubprocessException(“Child returned {}”.format(retcode), retcode)
opendm.system.SubprocessException: Child returned 139
===== Done, human-readable information to follow… =====
[ERROR] Uh oh! Processing stopped because of strange values in the reconstruction. This is often a sign that the input data has some issues or the software cannot deal with it. Have you followed best practices for data acquisition? See Flying Tips — OpenDroneMap 3.1.7 documentation
100 - done.
