Failed to update WebODM 1.2

WebODM
1

Hi,

I have tried to update WebODM to v1.2 several times but it got stuck at the same step to optimize the orthophotos as Cloud Optimized GeoTIF. How should I do to solve this issue?

Thanks.

Yu-Huang

The following lists the logs of webapp container:

:~$ sudo docker ps
CONTAINER ID IMAGE COMMAND CREATED STATUS PORTS NAMES
bca5f0a52d0f opendronemap/webodm_webapp “/bin/bash -c 'chmod…” 2 days ago Up 2 days 0.0.0.0:8000->8000/tcp webapp
133e1d42f55b opendronemap/webodm_webapp “/bin/bash -c '/webo…” 2 days ago Up 2 days worker
7976febe3213 opendronemap/nodeodm “/usr/bin/nodejs /va…” 2 days ago Up 2 days 0.0.0.0:32778->3000/tcp webodm_node-odm_1
a3903b1478c1 opendronemap/webodm_db “docker-entrypoint.s…” 2 days ago Up 2 days 0.0.0.0:32779->5432/tcp db

:~$ sudo docker logs bca5f0a52d0f
Postgres is up - executing command
wait-for-it.sh: waiting for broker:6379 without a timeout
wait-for-it.sh: broker:6379 is available after 0 seconds

| | / /__ / /_ / __ / __ / |/ /
| | /| / / _ / __ / / / / / / / /|/ /
| |/ |/ / __/ // / // / // / / / /
|/|/_/./_/__// //

Checking python version… 3.x, good!
Checking GDAL version… GDAL 2.4.3, released 2019/10/28, excellent!
Running migrations
Generated secret key
INFO Initializing GRASS engine using /usr/bin/grass78
Operations to perform:
Apply all migrations: admin, app, auth, contenttypes, guardian, nodeodm, sessions
Running migrations:
Applying app.0030_assure_cogeo…=====================================================================
Migrating TIFFs to Cloud Optimized GeoTIFFs, this might take a while!

Optimizing /webodm/app/media/project/1/task/44f49d01-c6e6-40cc-9cb0-6b41af032957/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/3/task/c958064c-8681-4db2-9cc7-885da7caf320/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/4/task/f755f4c8-60dd-4ea9-ba52-275d7cd6563a/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/5/task/758fb2f3-4275-40c0-9b20-cca1485ba81f/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/5/task/b26be919-85b8-4a6e-b3f7-a99bc63aacbd/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/6/task/ce34c4a0-4370-45dc-8bdd-cb44ed894cf7/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/7/task/03224719-a11d-41d5-b4a0-f3a0f08e341e/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/7/task/bfcc02c8-2fe8-459b-8d46-ad4258c36ee6/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/7/task/79764256-c2ee-4a1d-b236-d29a90b15d5b/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/7/task/e2bac62b-3bc2-4e34-a6f7-b77217f57601/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/8/task/5adc806c-4a2b-4e14-b9de-d495e479c33c/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/9/task/0c395685-111d-42c8-a8e9-d24e5ef2a66d/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/9/task/c42c0a54-9d7f-411e-aa59-52ae92e79dda/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/9/task/e56e0d84-9da2-48e9-b4d9-e6166d0a91fc/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/10/task/87c1712c-3dd4-473b-8795-4ab4b336cb62/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/10/task/4cda0b8b-cce8-4bd3-8884-dec52c0ad747/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/10/task/a769bed2-b559-4a4e-9e6e-8abc14e306a6/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/11/task/f6029e5f-b4fb-46d7-9e56-d8a5f4d2465e/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/11/task/e9e8176f-8933-43b4-9a42-6cbd9befbe81/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/12/task/eeed3a36-6d21-40d0-a96b-c902b8a5e456/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/13/task/1e521c14-ea0e-4c2c-b40f-9a3c99c70ea2/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/14/task/e3a1fdb9-fd6e-472f-a6b6-ac1478979315/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/14/task/2068d66a-ac10-4d3a-8038-436906d2c3b7/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/14/task/0f11023e-ba64-44d7-a5ca-f42e73afc4ef/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/14/task/2419e815-0179-46de-b8fa-b5072cc1542f/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/14/task/23d2b925-bedd-4289-ae93-2d9df4a33f14/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/14/task/fe7fb3bf-1fb0-4db0-8245-e3c9dd5c6956/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/14/task/fd0ead21-c554-446c-89b1-c1245146a024/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/14/task/5015eebd-dbff-4fae-a882-5b139ce44367/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/14/task/e0efe1a9-c30e-4fa1-83bd-a0439f794c3a/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/14/task/15e2ef58-3fe8-44e5-bba3-eaccb138cf4c/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/15/task/83bb84d6-75bd-4d8e-8533-d423736764ca/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/15/task/c3eb7cf1-6c6f-46cb-bd26-676e95df90f3/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/15/task/232ce564-989c-4816-a3d0-87a2cf98e0c0/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/17/task/fb331c3d-9646-4ff0-a4cd-4e8f0ab0e52a/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/18/task/46a63385-84c8-483f-93c9-16b0a2409395/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/21/task/5938e513-c137-4bfd-90dc-f95fbbd5b529/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/21/task/458517bf-1c69-445b-8d05-92ae253c2709/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/21/task/b4470c4b-3c78-419e-9457-fb10aaef3d25/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/21/task/5ddcece4-7b63-48be-a069-f45a6b859ed1/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/22/task/a200e201-64f0-4d3c-bbe0-13655b0a9243/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/22/task/72f41858-2004-411a-89e3-93d827e9f341/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/23/task/49091d08-214c-463d-82b2-44ed428fab49/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/24/task/2e6e36eb-49f5-4f69-a1df-a02e45ce1ccc/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/24/task/f715fb9d-263b-4d73-8856-3699cfb9e5b6/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/24/task/89306fdd-47cc-439b-9c4e-d8ed5c12e8ab/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/25/task/cd2f9fd8-1f23-4025-ba1f-1edbb25225f3/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/28/task/b11007cc-f62e-45a8-a416-e676b3a3e9db/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/29/task/00040b3f-29f8-453e-a14f-373ff884697b/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/29/task/9ae71062-d622-4f02-aa14-316dcecdc389/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/29/task/ba53f93c-3df8-4f5d-a2f4-534c7fd6b9d6/assets/odm_orthophoto/odm_orthophoto.tif
Optimizing /webodm/app/media/project/29/task/1026abf7-8687-45c1-8ddb-c8aebad18748/assets/odm_orthophoto/odm_orthophoto.tif
The following warnings were found:

  • The file is greater than 512xH or 512xW, it is recommended to include internal overviews

INFO Optimizing /webodm/app/media/project/29/task/1026abf7-8687-45c1-8ddb-c8aebad18748/assets/odm_orthophoto/odm_orthophoto.tif as Cloud Optimized GeoTIFF

2

How long did you let the update process run for? If you have lots of GeoTIFFs this process could take a while.

3

Hi Pierotofy,

Thanks for your reply.
I have tried to update several times. Each time I let the process run 2-4 days but all got stuck at the same lines of the logs like the following. Should I wait for a longer time, like a week?
Thanks.

Optimizing /webodm/app/media/project/29/task/1026abf7-8687-45c1-8ddb-c8aebad18748/assets/odm_orthophoto/odm_orthophoto.tif
The following warnings were found:

  • The file is greater than 512xH or 512xW, it is recommended to include internal overviews

INFO Optimizing /webodm/app/media/project/29/task/1026abf7-8687-45c1-8ddb-c8aebad18748/assets/odm_orthophoto/odm_orthophoto.tif as Cloud Optimized GeoTIFF

4

Ok, shouldn’t take that long, so something is causing troubles. If it gets stuck on the same file every time, I would try to eliminate the task / file in question, then retry to upgrade.

5

Thanks. I will move out the problematic task folder and try to update it again.

6

Good news. I have successfully updated the WebODM v1.2 after removing the four task folders with huge datasets of mapping long river corridor. But, the minor issue is that I can not delete these empty tasks by the management function of Administration > Application › Tasks in WebODM.

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